Understanding the molecular targets involved in Lupus Erythematosus (LE) is crucial for elucidating the disease's complex pathogenesis, identifying new therapeutic strategies, and supporting drug research and development. LE is a prototypic systemic autoimmune disease characterized by loss of immune tolerance, production of autoantibodies, immune complex deposition, and chronic inflammation leading to multi-organ damage. The disease involves dysregulation of both innate and adaptive immune responses. The targets included here—filtered for direct relevance to LE—collectively highlight key mechanistic nodes such as B-cell activation (e.g., CD19, BLK, BTK, CD28), aberrant complement activation (C5), dysregulated inflammasome and interferon signaling (CASP1, CGAS), and cell cycle or epigenetic regulators that modulate immune cell function (CDK4, CDK6, EZH2). These targets provide insight into disease progression, as they represent pathways that drive autoimmunity, perpetuate inflammation, and mediate tissue damage. Targeting these molecules has led to the development of novel therapeutics (e.g., anti-CD19, BTK inhibitors, complement inhibitors), some of which are in clinical use or trials. Mechanistic understanding of these targets accelerates rational drug design, biomarker discovery, and personalized medicine approaches in LE.
This category encompasses targets that are central to B cell development, activation, and signaling, processes that are critically dysregulated in Lupus Erythematosus. Aberrant B cell activation leads to autoantibody production, immune complex formation, and subsequent tissue inflammation and damage. Key targets include CD19 molecule (CD19), BLK proto-oncogene, Src family tyrosine kinase (BLK), Bruton tyrosine kinase (BTK), and CD28 molecule (CD28), all of which are mechanistically implicated in the pathogenesis of LE by promoting B cell hyperactivity and loss of tolerance.
CD19 is a transmembrane glycoprotein expressed exclusively on B cells, serving as a coreceptor that amplifies B cell receptor (BCR) signaling. Structurally, CD19 contains two extracellular Ig-like domains, a transmembrane region, and a cytoplasmic tail with multiple tyrosine residues that are phosphorylated upon activation. CD19 is regulated by BCR engagement and interacts with CD21, CD81, and other molecules to lower the threshold for B cell activation. In LE, CD19 is overexpressed on autoreactive B cells, facilitating their activation and survival. CD19 amplification of BCR signaling is a key driver of autoantibody production and B cell hyperactivity. Therapeutically, anti-CD19 monoclonal antibodies and CAR-T cell therapies are under clinical investigation for refractory LE, with early evidence showing B cell depletion and disease amelioration. CD19 is also a potential biomarker for B cell activity in LE (Entrez: 930, KEGG: 930, UniProt: P15391).
BLK is a Src-family tyrosine kinase predominantly expressed in B cells, involved in early B cell development and BCR signaling. BLK contains SH3, SH2, and kinase domains, and is regulated by phosphorylation and protein-protein interactions. Genetic variants in BLK are associated with increased LE susceptibility, particularly in Asian populations (OR 1.2–1.4, GWAS). BLK modulates BCR signaling thresholds and B cell tolerance; reduced BLK expression impairs negative selection, promoting autoreactive B cell survival. BLK interacts with other kinases (e.g., Lyn, BTK) and downstream effectors (e.g., Syk). While direct BLK inhibition is not currently in clinical use, its role in B cell signaling makes it a potential therapeutic target and biomarker (Entrez: 640, KEGG: 640, UniProt: P51451).
BTK is a non-receptor tyrosine kinase essential for BCR signaling and B cell maturation. The BTK protein has PH, SH3, SH2, and kinase domains, and is activated by membrane recruitment and phosphorylation. BTK mediates downstream activation of PLCγ2, calcium flux, and NF-κB signaling, leading to B cell proliferation and survival. In LE, elevated BTK activity is observed in autoreactive B cells, and BTK inhibition in mouse models reduces autoantibody titers and renal pathology. Several BTK inhibitors (e.g., ibrutinib, evobrutinib) are in clinical trials for LE, with evidence of reduced disease activity and B cell function. BTK is a validated drug target and is being explored as a biomarker for B cell activation in LE (Entrez: 695, KEGG: 695, UniProt: Q06187).
CD28 is a costimulatory receptor expressed on T cells, but its interaction with B cells is critical for T-dependent B cell activation. Structurally, CD28 is a single-pass transmembrane protein with an Ig-like extracellular domain. CD28 engagement by CD80/CD86 on antigen-presenting cells provides the second signal for T cell activation, leading to cytokine production (e.g., IL-21) that supports B cell differentiation and class-switch recombination. In LE, dysregulated CD28 signaling enhances T cell help for B cells, promoting autoantibody production. Blockade of the CD28-CD80/86 axis (e.g., abatacept) reduces disease activity in LE patients, although efficacy is variable. CD28 is a key node in the T-B cell interaction axis (Entrez: 940, KEGG: 940, UniProt: P10747).
This category includes targets that participate in the activation of the complement system and inflammatory cascades, both of which are central to tissue injury in Lupus Erythematosus. Complement C5 (C5) is a pivotal effector in the terminal complement pathway, and Caspase 1 (CASP1) is a key mediator of inflammasome activation and IL-1β production. Both are directly implicated in the propagation of inflammation and organ damage in LE.
Complement C5 is a 196 kDa glycoprotein cleaved into C5a and C5b during complement activation. C5a is a potent anaphylatoxin that recruits and activates neutrophils and monocytes, while C5b initiates the membrane attack complex (MAC). In LE, excessive complement activation leads to tissue deposition of immune complexes, C5a generation, and MAC-mediated cell lysis, contributing to nephritis and vasculitis. C5 is regulated by convertases and inhibitory proteins (e.g., CD55, CD59). Eculizumab, a monoclonal antibody against C5, has shown efficacy in complement-mediated diseases and is under investigation for LE nephritis. C5 levels and split products are biomarkers for disease activity (Entrez: 727, KEGG: 727, UniProt: P01031).
Caspase 1 is a cysteine protease that cleaves pro-IL-1β and pro-IL-18 to their active forms, mediating pyroptosis and inflammation. Structurally, CASP1 contains a CARD domain and a catalytic domain. It is activated by inflammasome complexes (e.g., NLRP3). In LE, increased CASP1 activity is observed in renal biopsies and peripheral blood, correlating with disease severity. CASP1 activation amplifies IL-1β-driven inflammation, promotes neutrophil recruitment, and exacerbates tissue injury. Inhibition of CASP1 or IL-1β signaling reduces disease in mouse models. CASP1 is a potential drug target and biomarker for inflammatory activity in LE (Entrez: 834, KEGG: 834, UniProt: P29466).
This category covers targets involved in innate immune sensing and type I interferon pathway activation, a hallmark of Lupus Erythematosus. Cyclic GMP-AMP synthase (CGAS) senses cytosolic DNA and triggers the STING pathway, leading to type I interferon production. Dysregulation of this axis is directly implicated in LE pathogenesis.
CGAS is a cytosolic DNA sensor that catalyzes the synthesis of 2'3'-cGAMP upon binding DNA, activating STING and inducing type I interferon (IFN-I) production. Structurally, CGAS contains a nucleotidyltransferase domain. CGAS is regulated by DNA binding, post-translational modifications, and subcellular localization. In LE, increased CGAS activity is detected in immune cells and tissues, driving chronic IFN-I responses and immune activation. Genetic or pharmacologic inhibition of CGAS-STING signaling ameliorates disease in mouse models. CGAS is a promising therapeutic target, with small-molecule inhibitors in preclinical development, and a potential biomarker for IFN-driven LE (Entrez: 115004, KEGG: 115004, UniProt: Q8N884).
This category includes targets that regulate cell cycle progression and epigenetic states in immune cells, contributing to the expansion and persistence of autoreactive lymphocytes in Lupus Erythematosus. Cyclin dependent kinase 4 (CDK4), cyclin dependent kinase 6 (CDK6), and enhancer of zeste 2 polycomb repressive complex 2 subunit (EZH2) are implicated in the proliferation and functional programming of pathogenic immune cells.
CDK4 is a serine/threonine kinase that regulates G1/S cell cycle transition via phosphorylation of Rb protein. Structurally, CDK4 forms a complex with cyclin D. In LE, increased CDK4 activity is observed in T and B cells, supporting their proliferation and survival. Inhibiting CDK4 reduces autoreactive lymphocyte expansion and attenuates disease in mouse models. CDK4 inhibitors (e.g., palbociclib) are being explored for their immunomodulatory effects in autoimmunity. CDK4 is also a potential biomarker for lymphoproliferation in LE (Entrez: 1019, KEGG: 1019, UniProt: P11802).
CDK6 is closely related to CDK4, with similar roles in cell cycle regulation. CDK6 forms complexes with D-type cyclins and phosphorylates Rb. In LE, CDK6 is upregulated in activated lymphocytes, promoting their proliferation. Inhibition of CDK6, alone or with CDK4, suppresses immune cell expansion and reduces disease severity in preclinical models. CDK6 is a potential target for immunomodulation in LE (Entrez: 1021, KEGG: 1021, UniProt: Q00534).
EZH2 is a histone methyltransferase that catalyzes H3K27 trimethylation, leading to transcriptional repression. Structurally, EZH2 is the catalytic subunit of PRC2. In LE, EZH2 is overexpressed in T cells and contributes to epigenetic silencing of genes involved in immune regulation and tolerance. EZH2 inhibition restores regulatory gene expression and suppresses autoreactive lymphocyte function in mouse models. EZH2 inhibitors (e.g., tazemetostat) are under investigation for autoimmune indications. EZH2 is a candidate biomarker for epigenetic dysregulation in LE (Entrez: 2146, KEGG: 2146, UniProt: Q15910).
| Name | Short Name | Entrez Gene | KEGG | UniProtKB |
|---|---|---|---|---|
| amyloid beta precursor protein | APP | 351 | 351 | P05067; B4DQM1 |
| amyloid beta precursor protein | App | 11820 | 11820 | P12023 |
| angiotensin converting enzyme 2 | Ace2 | 70008 | 70008 | Q8R0I0 |
| angiotensin converting enzyme 2 | ACE2 | 59272 | 59272 | Q9BYF1 |
| BLK proto-oncogene, Src family tyrosine kinase | BLK | 640 | 640 | P51451 |
| Bruton tyrosine kinase | BTK | 695 | 695 | Q06187 |
| caspase 1 | CASP1 | 834 | 834 | P29466 |
| CD19 molecule | CD19 | 930 | 930 | P15391 |
| CD28 molecule | CD28 | 940 | 940 | P10747 |
| cereblon | CRBN | 51185 | 51185 | Q96SW2 |
| complement C5 | C5 | 727 | 727 | P01031 |
| cyclic GMP-AMP synthase | CGAS | 115004 | 115004 | Q8N884 |
| cyclin dependent kinase 4 | CDK4 | 1019 | 1019 | P11802 |
| cyclin dependent kinase 6 | CDK6 | 1021 | 1021 | Q00534 |
| cyclin dependent kinase 7 | CDK7 | 1022 | 1022 | P50613 |
| dihydroorotate dehydrogenase (quinone) | DHODH | 1723 | 1723 | Q02127 |
| DNA topoisomerase I | TOP1 | 7150 | 7150 | P11387 |
| enhancer of zeste 2 polycomb repressive complex 2 subunit | EZH2 | 2146 | 2146 | Q15910 |
| G protein-coupled receptor 183 | GPR183 | 1880 | 1880 | P32249 |
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